Developing the Quantitative Histopathology Image Ontology : A case study using the hot spot detection problem

Interoperability across data sets is a key challenge for quantitative histopathological imaging. There is a need for an ontology that can support effective merging of pathological image data with associated clinical and demographic data. To foster organized, cross-disciplinary, information-driven collaborations in the pathological imaging field, we propose to develop an ontology to represent imaging data and methods used in pathological imaging and analysis, and call it Quantitative Histopathological Imaging Ontology – QHIO. We apply QHIO to breast cancer hot-spot detection with the goal of enhancing reliability of detection by promoting the sharing of data between image analysts

Endourologic Management of Upper Tract Transitional Cell Carcinoma following Cystectomy and Urinary Diversion

Traditionally, nephroureterectomy is the gold standard therapy for upper tract recurrence of transitional cell carcinoma (TCC) following cystectomy and urinary diversion. With advances in endoscopic equipment and improvements in technique, conservative endourologic management via a retrograde or antegrade approach is technically feasible with acceptable outcomes in patients with bilateral disease, solitary renal units, chronic renal insufficiency, or significant medical comorbidities. Contemporary studies have expanded the utility of these techniques to include low-grade, low-volume disease in patients with a normal contralateral kidney. The aim of this report is to review the current outcomes of conservative management for upper tract disease and discuss its application and relevance in patients following cystectomy with lower urinary tract reconstruction

Non-Rigid Registration between Histological and MR Images of the Prostate: A Joint Segmentation and Registration Framework

This paper presents a 3D non-rigid registration algorithm between histological and MR images of the prostate with cancer. To compensate for the loss of 3D integrity in the histology sectioning process, series of 2D histological slices are first reconstructed into a 3D histological volume. After that, the 3D histology-MRI registration is obtained by maximizing a) landmark similarity and b) cancer region overlap between the two images. The former aims to capture distortions at prostate boundary and internal bloblike structures; and the latter aims to capture distortions specifically at cancer regions. In particular, landmark similarities, the former, is maximized by an annealing process, where correspondences between the automatically-detected boundary and internal landmarks are iteratively established in a fuzzy-to-deterministic fashion. Cancer region overlap, the latter, is maximized in a joint cancer segmentation and registration framework, where the two interleaved problems – segmentation and registration – inform each other in an iterative fashion. Registration accuracy is established by comparing against human-rater-defined landmarks and by comparing with other methods. The ultimate goal of this registration is to warp the histologically-defined cancer ground truth into MRI, for more thoroughly understanding MRI signal characteristics of the prostate cancerous tissue, which will promote the MRI-based prostate cancer diagnosis in the future studies

Registering Histological and MR Images of Prostate for Image-based Cancer Detection

Rationale and Objectives Needle biopsy is currently the only way to confirm prostate cancer. To increase prostate cancer diagnostic rate, needles are expected to be deployed at suspicious cancer locations. High contrast MR imaging provides a powerful tool for detecting suspicious cancerous tissues. To do this, MR appearances of cancerous tissue should be characterized and learned from a sufficient number of prostate MR images with known cancer information. However, ground-truth cancer information is only available in histological images. Therefore, it is necessary to warp ground-truth cancerous regions in histological images to MR images by a registration procedure. The objective of this paper is to develop a registration technique for aligning histological and MR images of the same prostate. Material and Methods Five pairs of histological and T2-weighted MR images of radical prostatectomy specimens are collected. For each pair, registration is guided by two sets of correspondences that can be reliably established on prostate boundaries and internal salient blob-like structures of histological and MR images. Results Our developed registration method can accurately register histological and MR images. It yields results comparable to manual registration, in terms of landmark distance and volume overlap. It also outperforms both affine registration and boundary-guided registration methods. Conclusions We have developed a novel method for deformable registration of histological and MR images of the same prostate. Besides the collection of ground-truth cancer information in MR images, the method has other potential applications. An automatic, accurate registration of histological and MR images actually builds a bridge between in vivo anatomical information and ex vivo pathological information, which is valuable for various clinical studies

Longitudinal stability augmentation of seaplanes in planing

The towing tank experiments conducted at Yokohama National University from November 30 to December 9 in 2005 suggested a new way of suppressing a dangerous coupled motion between heave and pitch called porpoising. The research in this paper was developed on the observations made in the experiments and conducted numerical simulations to further investigate the parametric design space. Two linear-time-invariant models were developed: rigid-body planing craft (conventional float planes or flying boats), and flexibly supported planing craft. The latter could simulate the new method found in the experiments for suppressing porpoising. In this study, the stability of the oscillatory motions was analyzed to see the effect of design variables on the inception of porpoising. The parametric study of flexibly supported float planes in the context of porpoising was a new contribution in the conceptual design of seaplanes